Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AmrB | DR97_501 | DR97_5829 | DR97_501 | 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 family protein | annotation not available | 0.534 |
AmrB | DR97_5828 | DR97_5829 | DR97_5828 | 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 family protein | Membrane fusion protein, multidrug efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family | 0.999 |
DR97_2381 | DR97_501 | DR97_2381 | DR97_501 | annotation not available | annotation not available | 0.476 |
DR97_272 | DR97_501 | DR97_272 | DR97_501 | annotation not available | annotation not available | 0.474 |
DR97_272 | atuA | DR97_272 | DR97_5055 | annotation not available | Hypothetical protein; Uncharacterized protein | 0.518 |
DR97_272 | atuB | DR97_272 | DR97_5054 | annotation not available | annotation not available | 0.678 |
DR97_4492 | DR97_501 | DR97_4492 | DR97_501 | annotation not available | annotation not available | 0.451 |
DR97_4492 | atuB | DR97_4492 | DR97_5054 | annotation not available | annotation not available | 0.408 |
DR97_501 | AmrB | DR97_501 | DR97_5829 | annotation not available | 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 family protein | 0.534 |
DR97_501 | DR97_2381 | DR97_501 | DR97_2381 | annotation not available | annotation not available | 0.476 |
DR97_501 | DR97_272 | DR97_501 | DR97_272 | annotation not available | annotation not available | 0.474 |
DR97_501 | DR97_4492 | DR97_501 | DR97_4492 | annotation not available | annotation not available | 0.451 |
DR97_501 | DR97_5828 | DR97_501 | DR97_5828 | annotation not available | Membrane fusion protein, multidrug efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family | 0.521 |
DR97_501 | YcgL | DR97_501 | DR97_499 | annotation not available | annotation not available | 0.585 |
DR97_501 | atuA | DR97_501 | DR97_5055 | annotation not available | Hypothetical protein; Uncharacterized protein | 0.554 |
DR97_501 | atuB | DR97_501 | DR97_5054 | annotation not available | annotation not available | 0.530 |
DR97_501 | rbsC | DR97_501 | DR97_5900 | annotation not available | Branched-chain amino acid transport system / permease component family protein; Belongs to the binding-protein-dependent transport system permease family | 0.764 |
DR97_501 | rnd | DR97_501 | DR97_500 | annotation not available | Ribonuclease d; Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides | 0.588 |
DR97_5828 | AmrB | DR97_5828 | DR97_5829 | Membrane fusion protein, multidrug efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family | 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 family protein | 0.999 |
DR97_5828 | DR97_501 | DR97_5828 | DR97_501 | Membrane fusion protein, multidrug efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family | annotation not available | 0.521 |
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