STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CobKannotation not available (242 aa)    
Predicted Functional Partners:
cbiT
Catalyzes the methylation of both C-5 and C-15 in precorrin- 6Y to form precorrin-8X
 
 
 0.999
cbiD
Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A
 
 
 0.997
cobI
Methylates precorrin-2 at the C-20 position to produce precorrin-3A
 
 
 0.988
cobM
Catalyzes the methylation of C-11 in precorrin-4 to form precorrin-5
   
 0.987
cobJ
cobJ_cbiH: precorrin-3B C17-methyltransferase
 
  
 0.986
cobO
Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids (By similarity)
 
  
 0.954
cobG
Oxidoreductase; cobG: precorrin-3B synthase
 
  
 0.941
cobN
Catalyzes cobalt insertion in the corrin ring
 
  
 0.921
cobH
Catalyzes the conversion of precorrin-8X to hydrogenobyrinate
 
  
 0.910
cobQ
Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation.
 
  
 0.860
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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