STRINGSTRING
crt protein (Pseudomonas aeruginosa) - STRING interaction network
"crt" - annotation not available in Pseudomonas aeruginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
crtannotation not available (322 aa)    
Predicted Functional Partners:
fadI
3-ketoacyl-CoA thiolase; acCoA-C-Actrans- acetyl-CoA C-acetyltransferase family protein; Belongs to the thiolase family (425 aa)
 
 
  0.897
fadA
3-ketoacyl-CoA thiolase; Catalyzes the final step of fatty acid oxidation in which acetyl-CoA is released and the CoA ester of a fatty acid two carbons shorter is formed (391 aa)
 
  0.885
DR97_5182
annotation not available (160 aa)
   
        0.869
fadA1
3-ketoacyl-CoA thiolase; acCoA-C-Actrans- acetyl-CoA C-acetyltransferase family protein; Belongs to the thiolase family (394 aa)
 
  0.866
DR97_929
Thiolase, C-terminal domain protein (383 aa)
   
 
  0.858
fadA5
3-ketoacyl-CoA thiolase; acCoA-C-Actrans- acetyl-CoA C-acetyltransferase family protein; Belongs to the thiolase family (379 aa)
 
  0.847
phaJ
annotation not available (156 aa)
   
   
  0.815
atoB
acCoA-C-Actrans- acetyl-CoA C-acetyltransferase family protein; Belongs to the thiolase family (393 aa)
 
  0.802
fadD3
annotation not available (562 aa)
 
 
  0.788
fadD1
annotation not available (562 aa)
 
 
  0.787
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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