STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR97_549annotation not available (526 aa)    
Predicted Functional Partners:
flgJ
Flagellar rod assembly protein/muramidase flgj; Flagellum-specific muramidase which hydrolyzes the peptidoglycan layer to assemble the rod structure in the periplasmic space
 
  
 0.986
DR97_550
annotation not available
 
   
 0.954
flgD
Flagellar basal-body rod modification protein flgd; Required for flagellar hook formation. May act as a scaffolding protein
 
 
 0.904
flgH
Flagellar basal body l-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation
 
  
 0.884
fliJ
Flagellar biosynthesis chaperone; flagell_FliJ: flagellar export protein FliJ
 
  
 0.853
FlgN
annotation not available
 
  
 0.847
ycgR
annotation not available
 
  
 0.830
FliH
annotation not available
 
  
 0.829
flgE
flgEFG_subfam: flagellar hook-basal body family protein
  
 
 0.821
flgI
Flagellar basal body p-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation
  
  
 0.817
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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