STRINGSTRING
DR97_5544 protein (Pseudomonas aeruginosa) - STRING interaction network
"DR97_5544" - annotation not available in Pseudomonas aeruginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR97_5544annotation not available (200 aa)    
Predicted Functional Partners:
DR97_5542
Uncharacterized protein; conj_TOL_TraD- conjugative coupling factor TraD, PFGI-1 class (730 aa)
 
   
  0.970
traG
Uncharacterized protein (249 aa)
 
        0.969
DR97_5545
annotation not available (241 aa)
 
        0.968
DR97_5543
Integrating conjugative element , PFL_4695 family domain protein; ICE_PFL_4695- integrating conjugative element , PFL_4695 family domain protein (182 aa)
          0.965
DR97_5547
annotation not available (192 aa)
 
   
  0.965
DR97_5546
annotation not available (214 aa)
 
        0.934
DR97_1290
Uncharacterized protein; conj_TOL_TraD- conjugative coupling factor TraD, PFGI-1 class (718 aa)
 
   
  0.808
DR97_1289
Integrating conjugative element membrane protein (249 aa)
 
        0.801
DR97_5524
Uncharacterized protein; Conjugative transfer ATPase, PFL_4706 family; traC_PFL_4706- conjugative transfer ATPase, PFL_4706 family (963 aa)
 
     
  0.795
DR97_1293
annotation not available (239 aa)
 
        0.794
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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