STRINGSTRING
ssb2 protein (Pseudomonas aeruginosa) - STRING interaction network
"ssb2" - annotation not available in Pseudomonas aeruginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ssb2annotation not available (146 aa)    
Predicted Functional Partners:
DR97_5575
Uncharacterized protein (263 aa)
 
   
  0.923
inrR
Uncharacterized protein ORF C103 (175 aa)
 
          0.918
trbB
Putative conjugal transfer protein TrbB; trbB_P- P-type conjugative transfer ATPase TrbB (350 aa)
         
  0.855
topB2
topB- DNA topoisomerase III family protein (676 aa)
 
 
  0.853
DR97_5576
Conserved hypothetical protein (412 aa)
 
        0.817
DR97_5577
Coproporphyrinogen III oxidase (186 aa)
 
        0.816
DR97_1314
Uncharacterized protein (397 aa)
 
        0.815
DR97_1312
Integrating conjugative element protein (262 aa)
 
        0.814
DR97_1315
DUF2857 domain-containing protein (186 aa)
 
        0.813
DR97_5561
Uncharacterized protein (309 aa)
   
        0.807
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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