Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DR97_2581 | DR97_4076 | DR97_2581 | DR97_4076 | annotation not available | Hypothetical protein; Uncharacterized protein | 0.401 |
DR97_2581 | DR97_5713 | DR97_2581 | DR97_5713 | annotation not available | annotation not available | 0.531 |
DR97_2581 | DR97_6265 | DR97_2581 | DR97_6265 | annotation not available | Conserved hypothetical protein | 0.604 |
DR97_2841 | DR97_4076 | DR97_2841 | DR97_4076 | annotation not available | Hypothetical protein; Uncharacterized protein | 0.502 |
DR97_2841 | DR97_5713 | DR97_2841 | DR97_5713 | annotation not available | annotation not available | 0.590 |
DR97_2841 | DR97_6265 | DR97_2841 | DR97_6265 | annotation not available | Conserved hypothetical protein | 0.665 |
DR97_3759 | DR97_5713 | DR97_3759 | DR97_5713 | annotation not available | annotation not available | 0.667 |
DR97_3759 | pprA | DR97_3759 | DR97_1468 | annotation not available | Putative two-component sensor; Member of the two-component regulatory system PprA/PprB involved in biofilm formation by controlling the expression of many related genes including type IVb pili major subunit flp pilin, adhesin bapA or cupE fimbriae Modulates also quorum-sensing signal production acting on both negative and positive modulators . Functions as a heme sensor histidine kinase which is autophosphorylated at a histidine residue and transfers its phosphate group to PprB | 0.817 |
DR97_4076 | DR97_2581 | DR97_4076 | DR97_2581 | Hypothetical protein; Uncharacterized protein | annotation not available | 0.401 |
DR97_4076 | DR97_2841 | DR97_4076 | DR97_2841 | Hypothetical protein; Uncharacterized protein | annotation not available | 0.502 |
DR97_4076 | DR97_5713 | DR97_4076 | DR97_5713 | Hypothetical protein; Uncharacterized protein | annotation not available | 0.627 |
DR97_4076 | DR97_831 | DR97_4076 | DR97_831 | Hypothetical protein; Uncharacterized protein | Gcw_chp: conserved hypothetical family protein | 0.414 |
DR97_4076 | lppL | DR97_4076 | DR97_2647 | Hypothetical protein; Uncharacterized protein | annotation not available | 0.688 |
DR97_5610 | DR97_5713 | DR97_5610 | DR97_5713 | Hypothetical protein; DUF4946 domain-containing protein | annotation not available | 0.645 |
DR97_5610 | DR97_831 | DR97_5610 | DR97_831 | Hypothetical protein; DUF4946 domain-containing protein | Gcw_chp: conserved hypothetical family protein | 0.619 |
DR97_5610 | pprA | DR97_5610 | DR97_1468 | Hypothetical protein; DUF4946 domain-containing protein | Putative two-component sensor; Member of the two-component regulatory system PprA/PprB involved in biofilm formation by controlling the expression of many related genes including type IVb pili major subunit flp pilin, adhesin bapA or cupE fimbriae Modulates also quorum-sensing signal production acting on both negative and positive modulators . Functions as a heme sensor histidine kinase which is autophosphorylated at a histidine residue and transfers its phosphate group to PprB | 0.689 |
DR97_5713 | DR97_2581 | DR97_5713 | DR97_2581 | annotation not available | annotation not available | 0.531 |
DR97_5713 | DR97_2841 | DR97_5713 | DR97_2841 | annotation not available | annotation not available | 0.590 |
DR97_5713 | DR97_3759 | DR97_5713 | DR97_3759 | annotation not available | annotation not available | 0.667 |
DR97_5713 | DR97_4076 | DR97_5713 | DR97_4076 | annotation not available | Hypothetical protein; Uncharacterized protein | 0.627 |
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