DR97_5713 protein (Pseudomonas aeruginosa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
some 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

DR97_5713

annotation not available (129 aa)

Predicted Functional Partners:

DR97_5610

0.645

DR97_5998

0.628

DR97_4076

0.627

DR97_831

0.619

DR97_2841

0.590

DR97_6265

0.574

DR97_2581

0.531

DR97_3759

0.528

lppL

0.517

DR97_1473

0.493

Your Current Organism:

Pseudomonas aeruginosa

NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as simple tabular text output:

download

TSV: tab separated values - can be opened in Excel

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and annotated functions of the network proteins

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DR97_1473	DR97_5610	DR97_1473	DR97_5610	Putative secreted protein	DUF4946 domain-containing protein	0.782
DR97_1473	DR97_5713	DR97_1473	DR97_5713	Putative secreted protein	annotation not available	0.493
DR97_1473	DR97_5998	DR97_1473	DR97_5998	Putative secreted protein	Uncharacterized protein	0.779
DR97_1473	DR97_831	DR97_1473	DR97_831	Putative secreted protein	Gcw_chp: conserved hypothetical family protein	0.528
DR97_2581	DR97_4076	DR97_2581	DR97_4076	annotation not available	Uncharacterized protein	0.401
DR97_2581	DR97_5713	DR97_2581	DR97_5713	annotation not available	annotation not available	0.531
DR97_2581	DR97_6265	DR97_2581	DR97_6265	annotation not available	Conserved hypothetical protein	0.604
DR97_2841	DR97_4076	DR97_2841	DR97_4076	annotation not available	Uncharacterized protein	0.502
DR97_2841	DR97_5713	DR97_2841	DR97_5713	annotation not available	annotation not available	0.590
DR97_2841	DR97_6265	DR97_2841	DR97_6265	annotation not available	Conserved hypothetical protein	0.665
DR97_3759	DR97_5713	DR97_3759	DR97_5713	annotation not available	annotation not available	0.528
DR97_4076	DR97_2581	DR97_4076	DR97_2581	Uncharacterized protein	annotation not available	0.401
DR97_4076	DR97_2841	DR97_4076	DR97_2841	Uncharacterized protein	annotation not available	0.502
DR97_4076	DR97_5713	DR97_4076	DR97_5713	Uncharacterized protein	annotation not available	0.627
DR97_4076	DR97_831	DR97_4076	DR97_831	Uncharacterized protein	Gcw_chp: conserved hypothetical family protein	0.414
DR97_4076	lppL	DR97_4076	DR97_2647	Uncharacterized protein	annotation not available	0.688
DR97_5610	DR97_1473	DR97_5610	DR97_1473	DUF4946 domain-containing protein	Putative secreted protein	0.782
DR97_5610	DR97_5713	DR97_5610	DR97_5713	DUF4946 domain-containing protein	annotation not available	0.645
DR97_5610	DR97_831	DR97_5610	DR97_831	DUF4946 domain-containing protein	Gcw_chp: conserved hypothetical family protein	0.619
DR97_5713	DR97_1473	DR97_5713	DR97_1473	annotation not available	Putative secreted protein	0.493

page 1 of 3

Network

Neighborhood

Experiments

Cooccurrence

Textmining

Coexpression

Databases

Fusion

© STRING Consortium 2020

Credits

Access

Info

About