STRINGSTRING
Ech1 protein (Pseudomonas aeruginosa) - STRING interaction network
"Ech1" - annotation not available in Pseudomonas aeruginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ech1annotation not available (270 aa)    
Predicted Functional Partners:
mmgC1
acyl-CoA dehydrogenase, N-terminal domain protein (384 aa)
   
  0.951
IVD1
Isovaleryl-CoA dehydrogenase 1, mitochondrial; acyl-CoA dehydrogenase, N-terminal domain protein (387 aa)
   
  0.942
DR97_2375
acyl-CoA dehydrogenase, N-terminal domain protein (600 aa)
   
  0.941
DR97_261
annotation not available (509 aa)
 
  0.941
DR97_4349
annotation not available (510 aa)
 
  0.940
Gcdh
Glutaryl-CoA dehydrogenase, mitochondrial; acyl-CoA dehydrogenase, N-terminal domain protein (393 aa)
   
  0.934
DR97_138
annotation not available (229 aa)
 
   
    0.927
paaG
annotation not available (263 aa)
   
   
 
0.925
fadE
acyl-CoA dehydrogenase, N-terminal domain protein (815 aa)
     
  0.921
fabV
Enoyl-[acyl-carrier-protein] reductase [NADH]; Involved in the final reduction of the elongation cycle of fatty acid synthesis (FAS II). Catalyzes the reduction of a carbon-carbon double bond in an enoyl moiety that is covalently linked to an acyl carrier protein (ACP); Belongs to the TER reductase family (398 aa)
         
    0.900
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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