STRINGSTRING
oprB3 protein (Pseudomonas aeruginosa) - STRING interaction network
"oprB3" - annotation not available in Pseudomonas aeruginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
oprB3annotation not available (435 aa)    
Predicted Functional Partners:
oprD3
annotation not available (425 aa)
    
   
  0.903
oprC
Putative copper transport outer membrane porin OprC; tonB-copper- TonB-dependent copper receptor (719 aa)
    
     
  0.877
DR97_4651
annotation not available (440 aa)
            
  0.841
oprF
annotation not available (350 aa)
            
  0.762
oprO
annotation not available (438 aa)
            
  0.756
opdK
annotation not available (417 aa)
    
     
  0.733
gdhA3
PQQ_membr_DH- membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family protein (803 aa)
 
   
  0.690
oprG
annotation not available (232 aa)
            
  0.642
ompR1
Transcriptional regulatory , C terminal family protein (242 aa)
            
  0.624
DR97_3197
annotation not available (421 aa)
    
          0.577
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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