Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KguT | OprB | DR97_6171 | DR97_6142 | annotation not available | annotation not available | 0.683 |
KguT | gnuT | DR97_6171 | DR97_6111 | annotation not available | Transporter, gluconate:h+ symporter family protein; Belongs to the GntP permease family | 0.652 |
OprB | KguT | DR97_6142 | DR97_6171 | annotation not available | annotation not available | 0.683 |
OprB | OprQ | DR97_6142 | DR97_5193 | annotation not available | annotation not available | 0.877 |
OprB | gcd | DR97_6142 | DR97_6143 | annotation not available | PQQ_membr_DH: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family protein | 0.706 |
OprB | gnuT | DR97_6142 | DR97_6111 | annotation not available | Transporter, gluconate:h+ symporter family protein; Belongs to the GntP permease family | 0.681 |
OprB | opdK | DR97_6142 | DR97_2249 | annotation not available | annotation not available | 0.750 |
OprB | oprC | DR97_6142 | DR97_4079 | annotation not available | Iron complex outermembrane recepter protein; Putative copper transport outer membrane porin OprC; tonB-copper: TonB-dependent copper receptor | 0.877 |
OprB | oprF | DR97_6142 | DR97_109 | annotation not available | Major porin and structural outer membrane porin; Has porin activity, forming small water-filled channels. Also has a structural role in determining cell shape and ability to grow in low-osmolarity medium | 0.743 |
OprB | oprJ | DR97_6142 | DR97_1903 | annotation not available | Outer membrane protein, multidrug efflux system; Channel-forming component of a multidrug resistance efflux pump | 0.680 |
OprB | oprO | DR97_6142 | DR97_4650 | annotation not available | Pyrophosphate-specific outer membrane porin; Anion specific, the binding site has higher affinity for phosphate than chloride ions. Porin O has a higher affinity for polyphosphates (tripolyphosphate and pyrophosphate) while porin P has a higher affinity for orthophosphate | 0.849 |
OprB | oprP | DR97_6142 | DR97_4651 | annotation not available | Phosphate-selective porin opro and oprp; Anion specific, the binding site has higher affinity for phosphate than chloride ions. Porin O has a higher affinity for polyphosphates (tripolyphosphate and pyrophosphate) while porin P has a higher affinity for orthophosphate | 0.850 |
OprQ | OprB | DR97_5193 | DR97_6142 | annotation not available | annotation not available | 0.877 |
OprQ | oprC | DR97_5193 | DR97_4079 | annotation not available | Iron complex outermembrane recepter protein; Putative copper transport outer membrane porin OprC; tonB-copper: TonB-dependent copper receptor | 0.737 |
OprQ | oprF | DR97_5193 | DR97_109 | annotation not available | Major porin and structural outer membrane porin; Has porin activity, forming small water-filled channels. Also has a structural role in determining cell shape and ability to grow in low-osmolarity medium | 0.850 |
gcd | OprB | DR97_6143 | DR97_6142 | PQQ_membr_DH: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family protein | annotation not available | 0.706 |
gcd | gnuT | DR97_6143 | DR97_6111 | PQQ_membr_DH: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family protein | Transporter, gluconate:h+ symporter family protein; Belongs to the GntP permease family | 0.485 |
gnuT | KguT | DR97_6111 | DR97_6171 | Transporter, gluconate:h+ symporter family protein; Belongs to the GntP permease family | annotation not available | 0.652 |
gnuT | OprB | DR97_6111 | DR97_6142 | Transporter, gluconate:h+ symporter family protein; Belongs to the GntP permease family | annotation not available | 0.681 |
gnuT | gcd | DR97_6111 | DR97_6143 | Transporter, gluconate:h+ symporter family protein; Belongs to the GntP permease family | PQQ_membr_DH: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family protein | 0.485 |
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