Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DR97_1328 | DR97_6278 | DR97_1328 | DR97_6278 | annotation not available | annotation not available | 0.420 |
DR97_6277 | DR97_6278 | DR97_6277 | DR97_6278 | Hypothetical protein; Uncharacterized protein | annotation not available | 0.868 |
DR97_6277 | DR97_6279 | DR97_6277 | DR97_6279 | Hypothetical protein; Uncharacterized protein | Hypothetical protein; Mg(2+) transporter | 0.826 |
DR97_6277 | DR97_6281 | DR97_6277 | DR97_6281 | Hypothetical protein; Uncharacterized protein | Uncharacterized protein; Stress-induced bacterial acidophilic repeat motif protein | 0.425 |
DR97_6277 | glgB | DR97_6277 | DR97_6273 | Hypothetical protein; Uncharacterized protein | 1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position | 0.506 |
DR97_6277 | glgE | DR97_6277 | DR97_6275 | Hypothetical protein; Uncharacterized protein | Starch synthase (maltosyl-transferring); Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB | 0.539 |
DR97_6277 | katE | DR97_6277 | DR97_6280 | Hypothetical protein; Uncharacterized protein | Hydroperoxidase ii; Decomposes hydrogen peroxide into water and oxygen; serves to protect cells from the toxic effects of hydrogen peroxide | 0.579 |
DR97_6277 | ku | DR97_6277 | DR97_6276 | Hypothetical protein; Uncharacterized protein | Ku domain-containing protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Stimulates rNTP addition to DSB and end joining (ligation) of linear DNA by LigD, on 3'-overhangs and probably also 5'-overhangs and blunt dsDNA breaks. Binds both ends of linear dsDNA protecting it from exonuclease activity | 0.806 |
DR97_6277 | treS | DR97_6277 | DR97_6274 | Hypothetical protein; Uncharacterized protein | Maltose alpha-d-glucosyltransferase / alpha-amylase; treS_nterm: trehalose synthase | 0.560 |
DR97_6278 | DR97_1328 | DR97_6278 | DR97_1328 | annotation not available | annotation not available | 0.420 |
DR97_6278 | DR97_6277 | DR97_6278 | DR97_6277 | annotation not available | Hypothetical protein; Uncharacterized protein | 0.868 |
DR97_6278 | DR97_6279 | DR97_6278 | DR97_6279 | annotation not available | Hypothetical protein; Mg(2+) transporter | 0.845 |
DR97_6278 | DR97_6281 | DR97_6278 | DR97_6281 | annotation not available | Uncharacterized protein; Stress-induced bacterial acidophilic repeat motif protein | 0.433 |
DR97_6278 | atpB | DR97_6278 | DR97_2939 | annotation not available | F-type h+-transporting atpase subunit a; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane | 0.580 |
DR97_6278 | glgB | DR97_6278 | DR97_6273 | annotation not available | 1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position | 0.508 |
DR97_6278 | glgE | DR97_6278 | DR97_6275 | annotation not available | Starch synthase (maltosyl-transferring); Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB | 0.550 |
DR97_6278 | katE | DR97_6278 | DR97_6280 | annotation not available | Hydroperoxidase ii; Decomposes hydrogen peroxide into water and oxygen; serves to protect cells from the toxic effects of hydrogen peroxide | 0.623 |
DR97_6278 | ku | DR97_6278 | DR97_6276 | annotation not available | Ku domain-containing protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Stimulates rNTP addition to DSB and end joining (ligation) of linear DNA by LigD, on 3'-overhangs and probably also 5'-overhangs and blunt dsDNA breaks. Binds both ends of linear dsDNA protecting it from exonuclease activity | 0.812 |
DR97_6278 | treS | DR97_6278 | DR97_6274 | annotation not available | Maltose alpha-d-glucosyltransferase / alpha-amylase; treS_nterm: trehalose synthase | 0.585 |
DR97_6279 | DR97_6277 | DR97_6279 | DR97_6277 | Hypothetical protein; Mg(2+) transporter | Hypothetical protein; Uncharacterized protein | 0.826 |
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