Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DR97_1846 | pvcA | DR97_1846 | DR97_6296 | Multi-copper polyphenol oxidoreductase laccase family protein; Multicopper oxidase with polyphenol oxidase activity | annotation not available | 0.680 |
DR97_1846 | pvcB | DR97_1846 | DR97_6295 | Multi-copper polyphenol oxidoreductase laccase family protein; Multicopper oxidase with polyphenol oxidase activity | annotation not available | 0.684 |
DR97_1846 | pvcC | DR97_1846 | DR97_6294 | Multi-copper polyphenol oxidoreductase laccase family protein; Multicopper oxidase with polyphenol oxidase activity | 4-hydroxyphenylacetate 3-monooxygenase; Pyoverdine biosynthesis protein; 4-hydroxyphenylacetate 3-hydroxylase C terminal family protein | 0.843 |
DR97_6292 | pvcA | DR97_6292 | DR97_6296 | annotation not available | annotation not available | 0.672 |
DR97_6292 | pvcB | DR97_6292 | DR97_6295 | annotation not available | annotation not available | 0.683 |
DR97_6292 | pvcC | DR97_6292 | DR97_6294 | annotation not available | 4-hydroxyphenylacetate 3-monooxygenase; Pyoverdine biosynthesis protein; 4-hydroxyphenylacetate 3-hydroxylase C terminal family protein | 0.699 |
DR97_6292 | pvcD | DR97_6292 | DR97_6293 | annotation not available | annotation not available | 0.570 |
cupA1 | cupC2 | DR97_5724 | DR97_954 | annotation not available | Hypothetical protein; Chaperone protein EcpD; Pili assembly chaperone PapD, C-terminal domain protein | 0.847 |
cupA1 | pvcA | DR97_5724 | DR97_6296 | annotation not available | annotation not available | 0.593 |
cupC2 | cupA1 | DR97_954 | DR97_5724 | Hypothetical protein; Chaperone protein EcpD; Pili assembly chaperone PapD, C-terminal domain protein | annotation not available | 0.847 |
cupC2 | pvcA | DR97_954 | DR97_6296 | Hypothetical protein; Chaperone protein EcpD; Pili assembly chaperone PapD, C-terminal domain protein | annotation not available | 0.573 |
cupC2 | pvcB | DR97_954 | DR97_6295 | Hypothetical protein; Chaperone protein EcpD; Pili assembly chaperone PapD, C-terminal domain protein | annotation not available | 0.672 |
mupP | pvcA | DR97_4764 | DR97_6296 | N-acetyl-d-muramate 6-phosphate phosphatase; Specifically catalyzes the dephosphorylation of N- acetylmuramate 6-phosphate (MurNAc-6P) to MurNac (By similarity). Is involved in peptidoglycan recycling as part of a cell wall recycling pathway that bypasses de novo biosynthesis of the peptidoglycan precursor UDP-MurNAc . Plays a role in intrinsic resistance to fosfomycin, which targets the de novo synthesis of UDP- MurNAc | annotation not available | 0.671 |
nuoF | pvcA | DR97_5321 | DR97_6296 | Nadh oxidoreductase (quinone), f subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient (By similarity) | annotation not available | 0.571 |
oruR | pvcA | DR97_1113 | DR97_6296 | Helix-turn-helix domain protein; Probably activates the ArgJ gene that encodes ornithine acetyltransferase. Binds to its own promoter-operator region. Probably binds ornithine | annotation not available | 0.505 |
pvcA | DR97_1846 | DR97_6296 | DR97_1846 | annotation not available | Multi-copper polyphenol oxidoreductase laccase family protein; Multicopper oxidase with polyphenol oxidase activity | 0.680 |
pvcA | DR97_6292 | DR97_6296 | DR97_6292 | annotation not available | annotation not available | 0.672 |
pvcA | cupA1 | DR97_6296 | DR97_5724 | annotation not available | annotation not available | 0.593 |
pvcA | cupC2 | DR97_6296 | DR97_954 | annotation not available | Hypothetical protein; Chaperone protein EcpD; Pili assembly chaperone PapD, C-terminal domain protein | 0.573 |
pvcA | mupP | DR97_6296 | DR97_4764 | annotation not available | N-acetyl-d-muramate 6-phosphate phosphatase; Specifically catalyzes the dephosphorylation of N- acetylmuramate 6-phosphate (MurNAc-6P) to MurNac (By similarity). Is involved in peptidoglycan recycling as part of a cell wall recycling pathway that bypasses de novo biosynthesis of the peptidoglycan precursor UDP-MurNAc . Plays a role in intrinsic resistance to fosfomycin, which targets the de novo synthesis of UDP- MurNAc | 0.671 |
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