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lpdV protein (Pseudomonas aeruginosa) - STRING interaction network
"lpdV" - lipoamide_DH: dihydrolipoyl dehydrogenase in Pseudomonas aeruginosa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lpdVlipoamide_DH- dihydrolipoyl dehydrogenase (464 aa)    
Predicted Functional Partners:
bkdB
annotation not available (428 aa)
  0.999
bkdA2
annotation not available (334 aa)
 
  0.998
aceF
Acetyltransferase component of pyruvate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) (547 aa)
  0.997
sucB
sucB- dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase complex (409 aa)
  0.996
bkdA1
annotation not available (410 aa)
 
 
  0.993
pdhB
Pyruvate dehydrogenase E1 component subunit beta; Transketolase, C-terminal domain protein (333 aa)
 
  0.989
sucA
2oxo_dh_E1- oxoglutarate dehydrogenase (succinyl-transferring), E1 component (943 aa)
 
  0.977
DR97_4506
annotation not available (370 aa)
  0.975
aceE
Pyruvate dehydrogenase E1 component; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) (882 aa)
   
  0.970
pdhA
Uncharacterized protein; PDH_E1_alph_x- pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit (365 aa)
 
 
  0.944
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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