STRINGSTRING
bkdA1 protein (Pseudomonas aeruginosa) - STRING interaction network
"bkdA1" - annotation not available in Pseudomonas aeruginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bkdA1annotation not available (410 aa)    
Predicted Functional Partners:
bkdA2
annotation not available (334 aa)
  0.999
bkdB
annotation not available (428 aa)
 
  0.998
lpdV
lipoamide_DH- dihydrolipoyl dehydrogenase (464 aa)
 
 
  0.993
pdhB
Pyruvate dehydrogenase E1 component subunit beta; Transketolase, C-terminal domain protein (333 aa)
 
  0.992
lpd3
lipoamide_DH- dihydrolipoyl dehydrogenase (466 aa)
 
 
  0.939
lpd
lipoamide_DH- dihydrolipoyl dehydrogenase (478 aa)
 
 
  0.936
ilvE
Branched-chain-amino-acid aminotransferase; Acts on leucine, isoleucine and valine; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family (307 aa)
   
 
  0.922
ldh
annotation not available (341 aa)
   
 
  0.922
DR97_4506
annotation not available (370 aa)
 
 
  0.841
metC
annotation not available (394 aa)
     
 
    0.828
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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