Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
algA | galU | DR97_4391 | DR97_5824 | Mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase; Produces a precursor for alginate polymerization. The alginate layer provides a protective barrier against host immune defenses and antibiotics | UTP--glucose-1-phosphate uridylyltransferase; May play a role in stationary phase survival | 0.541 |
algA | pslA | DR97_4391 | DR97_6320 | Mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase; Produces a precursor for alginate polymerization. The alginate layer provides a protective barrier against host immune defenses and antibiotics | Putative glycosyl transferase; wcaJ_sugtrans: undecaprenyl-phosphate glucose phosphotransferase | 0.957 |
algA | pslB | DR97_4391 | DR97_6319 | Mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase; Produces a precursor for alginate polymerization. The alginate layer provides a protective barrier against host immune defenses and antibiotics | Mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family | 0.838 |
algA | pslD | DR97_4391 | DR97_6317 | Mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase; Produces a precursor for alginate polymerization. The alginate layer provides a protective barrier against host immune defenses and antibiotics | annotation not available | 0.438 |
algA | pslE | DR97_4391 | DR97_6316 | Mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase; Produces a precursor for alginate polymerization. The alginate layer provides a protective barrier against host immune defenses and antibiotics | annotation not available | 0.813 |
algA | pslL | DR97_4391 | DR97_6308 | Mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase; Produces a precursor for alginate polymerization. The alginate layer provides a protective barrier against host immune defenses and antibiotics | annotation not available | 0.418 |
galU | algA | DR97_5824 | DR97_4391 | UTP--glucose-1-phosphate uridylyltransferase; May play a role in stationary phase survival | Mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase; Produces a precursor for alginate polymerization. The alginate layer provides a protective barrier against host immune defenses and antibiotics | 0.541 |
galU | pslA | DR97_5824 | DR97_6320 | UTP--glucose-1-phosphate uridylyltransferase; May play a role in stationary phase survival | Putative glycosyl transferase; wcaJ_sugtrans: undecaprenyl-phosphate glucose phosphotransferase | 0.941 |
galU | pslB | DR97_5824 | DR97_6319 | UTP--glucose-1-phosphate uridylyltransferase; May play a role in stationary phase survival | Mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family | 0.659 |
galU | pslE | DR97_5824 | DR97_6316 | UTP--glucose-1-phosphate uridylyltransferase; May play a role in stationary phase survival | annotation not available | 0.814 |
pslA | algA | DR97_6320 | DR97_4391 | Putative glycosyl transferase; wcaJ_sugtrans: undecaprenyl-phosphate glucose phosphotransferase | Mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase; Produces a precursor for alginate polymerization. The alginate layer provides a protective barrier against host immune defenses and antibiotics | 0.957 |
pslA | galU | DR97_6320 | DR97_5824 | Putative glycosyl transferase; wcaJ_sugtrans: undecaprenyl-phosphate glucose phosphotransferase | UTP--glucose-1-phosphate uridylyltransferase; May play a role in stationary phase survival | 0.941 |
pslA | pslB | DR97_6320 | DR97_6319 | Putative glycosyl transferase; wcaJ_sugtrans: undecaprenyl-phosphate glucose phosphotransferase | Mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family | 0.997 |
pslA | pslC | DR97_6320 | DR97_6318 | Putative glycosyl transferase; wcaJ_sugtrans: undecaprenyl-phosphate glucose phosphotransferase | annotation not available | 0.974 |
pslA | pslD | DR97_6320 | DR97_6317 | Putative glycosyl transferase; wcaJ_sugtrans: undecaprenyl-phosphate glucose phosphotransferase | annotation not available | 0.996 |
pslA | pslE | DR97_6320 | DR97_6316 | Putative glycosyl transferase; wcaJ_sugtrans: undecaprenyl-phosphate glucose phosphotransferase | annotation not available | 0.995 |
pslA | pslG | DR97_6320 | DR97_6314 | Putative glycosyl transferase; wcaJ_sugtrans: undecaprenyl-phosphate glucose phosphotransferase | Polysaccharide biosynthesis protein pslg; Belongs to the glycosyl hydrolase 5 (cellulase A) family | 0.960 |
pslA | pslH | DR97_6320 | DR97_6313 | Putative glycosyl transferase; wcaJ_sugtrans: undecaprenyl-phosphate glucose phosphotransferase | annotation not available | 0.962 |
pslA | pslJ | DR97_6320 | DR97_6311 | Putative glycosyl transferase; wcaJ_sugtrans: undecaprenyl-phosphate glucose phosphotransferase | annotation not available | 0.970 |
pslA | pslL | DR97_6320 | DR97_6308 | Putative glycosyl transferase; wcaJ_sugtrans: undecaprenyl-phosphate glucose phosphotransferase | annotation not available | 0.962 |
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