Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DR97_1829 | DR97_1917 | DR97_1829 | DR97_1917 | Conserved hypothetical protein | Uncharacterized protein; GTP-binding protein | 0.624 |
DR97_1829 | DR97_677 | DR97_1829 | DR97_677 | Conserved hypothetical protein | annotation not available | 0.750 |
DR97_1829 | DR97_678 | DR97_1829 | DR97_678 | Conserved hypothetical protein | Cis-L-3-hydroxyproline dehydratase; Uncharacterized protein | 0.538 |
DR97_1829 | DR97_679 | DR97_1829 | DR97_679 | Conserved hypothetical protein | HEQRo_perm_3TM: amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein | 0.585 |
DR97_1829 | DR97_680 | DR97_1829 | DR97_680 | Conserved hypothetical protein | HEQRo_perm_3TM: amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein | 0.706 |
DR97_1829 | DR97_682 | DR97_1829 | DR97_682 | Conserved hypothetical protein | Trans-L-3-hydroxyproline dehydratase; Probably catalyzes the dehydration of trans-3-hydroxy-L- proline (t3LHyp) to Delta(1)-pyrroline-2-carboxylate (Pyr2C). Is likely involved in a degradation pathway that converts t3LHyp to L-proline, which would allow P.aeruginosa to grow on t3LHyp as a sole carbon source . Displays neither trans-4-hydroxy-L-proline (t4LHyp) epimerase nor proline racemase activity | 0.580 |
DR97_1829 | DR97_683 | DR97_1829 | DR97_683 | Conserved hypothetical protein | 1-pyrroline-4-hydroxy-2-carboxylate deaminase; Belongs to the DapA family | 0.632 |
DR97_1829 | DR97_684 | DR97_1829 | DR97_684 | Conserved hypothetical protein | annotation not available | 0.527 |
DR97_1829 | GlnQ | DR97_1829 | DR97_681 | Conserved hypothetical protein | annotation not available | 0.750 |
DR97_1829 | phoA2 | DR97_1829 | DR97_1431 | Conserved hypothetical protein | Alkaline phosphatase l; Has both a phosphomonoesterase and phosphodiesterase activity | 0.750 |
DR97_1917 | DR97_1829 | DR97_1917 | DR97_1829 | Uncharacterized protein; GTP-binding protein | Conserved hypothetical protein | 0.624 |
DR97_1917 | DR97_677 | DR97_1917 | DR97_677 | Uncharacterized protein; GTP-binding protein | annotation not available | 0.756 |
DR97_1917 | DR97_678 | DR97_1917 | DR97_678 | Uncharacterized protein; GTP-binding protein | Cis-L-3-hydroxyproline dehydratase; Uncharacterized protein | 0.559 |
DR97_1917 | DR97_679 | DR97_1917 | DR97_679 | Uncharacterized protein; GTP-binding protein | HEQRo_perm_3TM: amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein | 0.556 |
DR97_1917 | DR97_680 | DR97_1917 | DR97_680 | Uncharacterized protein; GTP-binding protein | HEQRo_perm_3TM: amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein | 0.612 |
DR97_1917 | DR97_682 | DR97_1917 | DR97_682 | Uncharacterized protein; GTP-binding protein | Trans-L-3-hydroxyproline dehydratase; Probably catalyzes the dehydration of trans-3-hydroxy-L- proline (t3LHyp) to Delta(1)-pyrroline-2-carboxylate (Pyr2C). Is likely involved in a degradation pathway that converts t3LHyp to L-proline, which would allow P.aeruginosa to grow on t3LHyp as a sole carbon source . Displays neither trans-4-hydroxy-L-proline (t4LHyp) epimerase nor proline racemase activity | 0.606 |
DR97_1917 | DR97_683 | DR97_1917 | DR97_683 | Uncharacterized protein; GTP-binding protein | 1-pyrroline-4-hydroxy-2-carboxylate deaminase; Belongs to the DapA family | 0.620 |
DR97_1917 | DR97_684 | DR97_1917 | DR97_684 | Uncharacterized protein; GTP-binding protein | annotation not available | 0.535 |
DR97_1917 | GlnQ | DR97_1917 | DR97_681 | Uncharacterized protein; GTP-binding protein | annotation not available | 0.674 |
DR97_1917 | phoA2 | DR97_1917 | DR97_1431 | Uncharacterized protein; GTP-binding protein | Alkaline phosphatase l; Has both a phosphomonoesterase and phosphodiesterase activity | 0.618 |
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