STRINGSTRING
spr protein (Pseudomonas aeruginosa) - STRING interaction network
"spr" - Murein DD-endopeptidase MepH in Pseudomonas aeruginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sprMurein DD-endopeptidase MepH (203 aa)    
Predicted Functional Partners:
cobB2
annotation not available (256 aa)
              0.672
DR97_735
annotation not available (177 aa)
 
   
0.664
DR97_734
annotation not available (220 aa)
              0.630
DR97_738
annotation not available (466 aa)
              0.619
DR97_1582
annotation not available (307 aa)
   
  0.518
DR97_134
2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid (315 aa)
         
  0.441
panE
2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid (303 aa)
         
  0.435
safA
Membrane-bound lytic murein transglycosylase D; spore_safA- spore coat assembly SafA domain protein (534 aa)
 
 
  0.427
ftsX
Cell division protein FtsX; Part of the ABC transporter FtsEX involved in cellular division (335 aa)
 
     
  0.417
DR97_3620
annotation not available (479 aa)
 
  0.410
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
Server load: low (24%) [HD]