Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DR97_2140 | DR97_2141 | DR97_2140 | DR97_2141 | annotation not available | annotation not available | 0.970 |
DR97_2140 | DR97_5024 | DR97_2140 | DR97_5024 | annotation not available | annotation not available | 0.529 |
DR97_2140 | DR97_5666 | DR97_2140 | DR97_5666 | annotation not available | Hypothetical protein; Putative secreted protein | 0.515 |
DR97_2140 | DR97_5697 | DR97_2140 | DR97_5697 | annotation not available | annotation not available | 0.539 |
DR97_2140 | DR97_5790 | DR97_2140 | DR97_5790 | annotation not available | Lysr family transcriptional regulator, regulator for bpeef and oprc; Belongs to the LysR transcriptional regulatory family | 0.432 |
DR97_2140 | DR97_793 | DR97_2140 | DR97_793 | annotation not available | Bacterial regulatory helix-turn-helix , lysr family protein; Belongs to the LysR transcriptional regulatory family | 0.570 |
DR97_2140 | dsbD2 | DR97_2140 | DR97_5696 | annotation not available | Cytochrome c biogenesis transmembrane region family protein; Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps | 0.534 |
DR97_2140 | dsbG | DR97_2140 | DR97_5698 | annotation not available | Disulfide isomerase/thiol-disulfide oxidase; Involved in disulfide bond formation. Functions probably as a disulfide isomerase with a narrower substrate specificity than DsbC. DsbG is maintained in a reduced state by DsbD (By similarity) | 0.519 |
DR97_2141 | DR97_2140 | DR97_2141 | DR97_2140 | annotation not available | annotation not available | 0.970 |
DR97_2141 | DR97_5024 | DR97_2141 | DR97_5024 | annotation not available | annotation not available | 0.545 |
DR97_2141 | DR97_5666 | DR97_2141 | DR97_5666 | annotation not available | Hypothetical protein; Putative secreted protein | 0.536 |
DR97_2141 | DR97_5697 | DR97_2141 | DR97_5697 | annotation not available | annotation not available | 0.624 |
DR97_2141 | DR97_793 | DR97_2141 | DR97_793 | annotation not available | Bacterial regulatory helix-turn-helix , lysr family protein; Belongs to the LysR transcriptional regulatory family | 0.598 |
DR97_2141 | dsbD2 | DR97_2141 | DR97_5696 | annotation not available | Cytochrome c biogenesis transmembrane region family protein; Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps | 0.581 |
DR97_2141 | dsbG | DR97_2141 | DR97_5698 | annotation not available | Disulfide isomerase/thiol-disulfide oxidase; Involved in disulfide bond formation. Functions probably as a disulfide isomerase with a narrower substrate specificity than DsbC. DsbG is maintained in a reduced state by DsbD (By similarity) | 0.546 |
DR97_5011 | DR97_5790 | DR97_5011 | DR97_5790 | Bacterial regulatory helix-turn-helix , lysr family protein; Belongs to the LysR transcriptional regulatory family | Lysr family transcriptional regulator, regulator for bpeef and oprc; Belongs to the LysR transcriptional regulatory family | 0.605 |
DR97_5011 | DR97_793 | DR97_5011 | DR97_793 | Bacterial regulatory helix-turn-helix , lysr family protein; Belongs to the LysR transcriptional regulatory family | Bacterial regulatory helix-turn-helix , lysr family protein; Belongs to the LysR transcriptional regulatory family | 0.588 |
DR97_5024 | DR97_2140 | DR97_5024 | DR97_2140 | annotation not available | annotation not available | 0.529 |
DR97_5024 | DR97_2141 | DR97_5024 | DR97_2141 | annotation not available | annotation not available | 0.545 |
DR97_5024 | DR97_5666 | DR97_5024 | DR97_5666 | annotation not available | Hypothetical protein; Putative secreted protein | 0.650 |
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