STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT74204.1acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (398 aa)    
Predicted Functional Partners:
SIT74903.1
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase.
 
 0.998
SIT90995.1
3-hydroxyacyl-CoA dehydrogenase.
 0.927
SIT74348.1
Phosphopantetheine attachment site.
  
 
 0.874
SIT87282.1
Acyl transferase domain-containing protein.
  
 
 0.850
lcdH
Carnitine 3-dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-carnitine to 3- dehydrocarnitine.
  
 0.802
SIT74198.1
Pimeloyl-ACP methyl ester carboxylesterase.
    
  0.791
SIT74213.1
Uncharacterized domain 1-containing protein.
       0.774
SIT76945.1
Indolepyruvate ferredoxin oxidoreductase.
    
 0.735
SIT77014.1
Citrate synthase; Belongs to the citrate synthase family.
  
 0.686
SIT74829.1
Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+).
    
 0.678
Your Current Organism:
Yoonia rosea
NCBI taxonomy Id: 287098
Other names: CIP 107851, DSM 29591, KMM 6003, LMG 22534, LMG:22534, Loktanella rosea, Loktanella rosea Ivanova et al. 2005, Y. rosea, strain Fg36
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