STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT74985.1Transcriptional regulator, LacI family. (341 aa)    
Predicted Functional Partners:
SIT88652.1
Glutamate synthase (NADPH) large subunit.
    
 
 0.949
SIT90990.1
Phosphocarrier protein.
   
 
 0.827
SIT74990.1
Sorbitol-binding protein /mannitol-binding protein.
 
     0.757
SIT75027.1
Mannitol 2-dehydrogenase.
 
   
 0.742
SIT74999.1
Sorbitol ABC transporter membrane protein.
 
     0.683
SIT75022.1
D-sorbitol dehydrogenase (acceptor).
 
 
   0.666
SIT75006.1
Sorbitol ABC transporter membrane protein.
 
     0.633
SIT83899.1
Signal transduction histidine kinase.
    
 
 0.527
SIT75015.1
Sorbitol ABC transporter ATP-binding protein.
 
     0.515
SIT74979.1
5'-nucleotidase; Belongs to the 5'-nucleotidase family.
       0.475
Your Current Organism:
Yoonia rosea
NCBI taxonomy Id: 287098
Other names: CIP 107851, DSM 29591, KMM 6003, LMG 22534, LMG:22534, Loktanella rosea, Loktanella rosea Ivanova et al. 2005, Y. rosea, strain Fg36
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.