STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT75015.1Sorbitol ABC transporter ATP-binding protein. (334 aa)    
Predicted Functional Partners:
SIT75006.1
Sorbitol ABC transporter membrane protein.
 0.998
SIT74999.1
Sorbitol ABC transporter membrane protein.
 
  0.997
SIT74990.1
Sorbitol-binding protein /mannitol-binding protein.
 
  0.989
SIT84135.1
ATP-binding cassette, subfamily B, MsbA.
 
     
0.899
SIT80434.1
ATP-binding cassette, subfamily B.
 
     
0.896
SIT84479.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
  0.885
SIT91739.1
Molybdate transport system permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
   
  0.883
SIT87355.1
Oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
     
0.876
SIT90189.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
     
0.870
SIT87402.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
  0.864
Your Current Organism:
Yoonia rosea
NCBI taxonomy Id: 287098
Other names: CIP 107851, DSM 29591, KMM 6003, LMG 22534, LMG:22534, Loktanella rosea, Loktanella rosea Ivanova et al. 2005, Y. rosea, strain Fg36
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.