Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIT75789.1 | SIT75798.1 | SAMN05421665_0257 | SAMN05421665_0258 | Repeat domain-containing protein. | Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain. | 0.954 |
SIT75789.1 | SIT75804.1 | SAMN05421665_0257 | SAMN05421665_0259 | Repeat domain-containing protein. | Xylose-binding protein. | 0.900 |
SIT75789.1 | SIT75813.1 | SAMN05421665_0257 | SAMN05421665_0260 | Repeat domain-containing protein. | D-xylose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. | 0.845 |
SIT75789.1 | SIT75821.1 | SAMN05421665_0257 | SAMN05421665_0261 | Repeat domain-containing protein. | Monosaccharide ABC transporter ATP-binding protein, CUT2 family. | 0.829 |
SIT75789.1 | xylA | SAMN05421665_0257 | SAMN05421665_0263 | Repeat domain-containing protein. | D-xylose isomerase; Belongs to the xylose isomerase family. | 0.612 |
SIT75798.1 | SIT75789.1 | SAMN05421665_0258 | SAMN05421665_0257 | Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain. | Repeat domain-containing protein. | 0.954 |
SIT75798.1 | SIT75804.1 | SAMN05421665_0258 | SAMN05421665_0259 | Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain. | Xylose-binding protein. | 0.836 |
SIT75798.1 | SIT75813.1 | SAMN05421665_0258 | SAMN05421665_0260 | Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain. | D-xylose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. | 0.761 |
SIT75798.1 | SIT75821.1 | SAMN05421665_0258 | SAMN05421665_0261 | Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain. | Monosaccharide ABC transporter ATP-binding protein, CUT2 family. | 0.771 |
SIT75798.1 | SIT79626.1 | SAMN05421665_0258 | SAMN05421665_0976 | Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain. | beta-N-acetylhexosaminidase. | 0.742 |
SIT75798.1 | SIT81570.1 | SAMN05421665_0258 | SAMN05421665_1292 | Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain. | Mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family. | 0.856 |
SIT75798.1 | SIT84001.1 | SAMN05421665_0258 | SAMN05421665_1769 | Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain. | N-acetylglucosamine 6-phosphate deacetylase. | 0.831 |
SIT75798.1 | SIT91748.1 | SAMN05421665_0258 | SAMN05421665_3465 | Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain. | UDP-N-acetylglucosamine 2-epimerase (hydrolysing). | 0.904 |
SIT75798.1 | pgi | SAMN05421665_0258 | SAMN05421665_0557 | Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.743 |
SIT75798.1 | xylA | SAMN05421665_0258 | SAMN05421665_0263 | Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain. | D-xylose isomerase; Belongs to the xylose isomerase family. | 0.835 |
SIT75804.1 | SIT75789.1 | SAMN05421665_0259 | SAMN05421665_0257 | Xylose-binding protein. | Repeat domain-containing protein. | 0.900 |
SIT75804.1 | SIT75798.1 | SAMN05421665_0259 | SAMN05421665_0258 | Xylose-binding protein. | Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain. | 0.836 |
SIT75804.1 | SIT75813.1 | SAMN05421665_0259 | SAMN05421665_0260 | Xylose-binding protein. | D-xylose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. | 0.992 |
SIT75804.1 | SIT75821.1 | SAMN05421665_0259 | SAMN05421665_0261 | Xylose-binding protein. | Monosaccharide ABC transporter ATP-binding protein, CUT2 family. | 0.965 |
SIT75804.1 | xylA | SAMN05421665_0259 | SAMN05421665_0263 | Xylose-binding protein. | D-xylose isomerase; Belongs to the xylose isomerase family. | 0.806 |
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