STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT75798.1Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain. (421 aa)    
Predicted Functional Partners:
SIT75789.1
Repeat domain-containing protein.
 
     0.954
SIT91748.1
UDP-N-acetylglucosamine 2-epimerase (hydrolysing).
 
    
 0.904
SIT81570.1
Mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family.
    
 0.856
SIT75804.1
Xylose-binding protein.
 
     0.836
xylA
D-xylose isomerase; Belongs to the xylose isomerase family.
 
  
 0.835
SIT84001.1
N-acetylglucosamine 6-phosphate deacetylase.
 
 0.831
SIT75821.1
Monosaccharide ABC transporter ATP-binding protein, CUT2 family.
     0.771
SIT75813.1
D-xylose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
     0.761
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.743
SIT79626.1
beta-N-acetylhexosaminidase.
    
 0.742
Your Current Organism:
Yoonia rosea
NCBI taxonomy Id: 287098
Other names: CIP 107851, DSM 29591, KMM 6003, LMG 22534, LMG:22534, Loktanella rosea, Loktanella rosea Ivanova et al. 2005, Y. rosea, strain Fg36
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