STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT76078.1Carbohydrate ABC transporter substrate-binding protein, CUT1 family. (433 aa)    
Predicted Functional Partners:
ugpE
Carbohydrate ABC transporter membrane protein 2, CUT1 family; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.
 
  0.969
SIT76074.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
  0.962
ugpE-2
Carbohydrate ABC transporter membrane protein 2, CUT1 family; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.
 
  0.929
SIT85730.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
  
  0.911
ugpC
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Part of the ABC transporter complex UgpABCE involved in sn- glycerol-3-phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. sn-glycerol-3- phosphate importer (TC 3.A.1.1.3) family.
 
  0.866
SIT76048.1
Metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family.
 
     0.860
SIT75006.1
Sorbitol ABC transporter membrane protein.
  
 0.816
SIT77446.1
Maltose ABC transporter membrane protein.
  
  0.713
SIT87402.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  
  0.711
SIT87630.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  
  0.711
Your Current Organism:
Yoonia rosea
NCBI taxonomy Id: 287098
Other names: CIP 107851, DSM 29591, KMM 6003, LMG 22534, LMG:22534, Loktanella rosea, Loktanella rosea Ivanova et al. 2005, Y. rosea, strain Fg36
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