STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT76121.1Outer membrane transport energization protein ExbD. (115 aa)    
Predicted Functional Partners:
SIT76112.1
Outer membrane transport energization protein TonB.
 
 
 0.997
SIT76126.1
Outer membrane transport energization protein ExbB.
 
 
 0.997
SIT76115.1
Biopolymer transport protein ExbD.
 
     0.967
SIT76131.1
Hypothetical protein.
 
     0.957
tolQ
Cell division and transport-associated protein TolQ; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
 
 0.936
SIT91563.1
Cell division and transport-associated protein TolA.
  
 
 0.933
SIT76202.1
Hemoglobin/transferrin/lactoferrin receptor protein.
 
  
 0.909
SIT76194.1
Putative hemin transport protein.
 
   
 0.803
hmuV
Iron complex transport system ATP-binding protein; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system.
 
   
 0.792
SIT76193.1
Iron complex transport system substrate-binding protein.
 
  
 0.792
Your Current Organism:
Yoonia rosea
NCBI taxonomy Id: 287098
Other names: CIP 107851, DSM 29591, KMM 6003, LMG 22534, LMG:22534, Loktanella rosea, Loktanella rosea Ivanova et al. 2005, Y. rosea, strain Fg36
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.