STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT78545.15-deoxyglucuronate isomerase. (280 aa)    
Predicted Functional Partners:
SIT78558.1
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase; Belongs to the TPP enzyme family.
 
 
 0.997
SIT78551.1
5-dehydro-2-deoxygluconokinase.
 
 
 0.996
SIT74436.1
5-dehydro-2-deoxygluconokinase.
 
 
 0.989
SIT74429.1
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase; Belongs to the TPP enzyme family.
 
 
 0.983
SIT78541.1
Fructose-bisphosphate aldolase, class II.
 
  
 0.957
SIT78569.1
2-keto-myo-inositol dehydratase.
 
  
 0.952
SIT78563.1
Predicted dehydrogenase.
 
    0.940
SIT78575.1
Predicted dehydrogenase.
 
    0.923
SIT74438.1
Myo-inositol 2-dehydrogenase.
 
    0.830
SIT74421.1
2-keto-myo-inositol dehydratase.
 
  
 0.778
Your Current Organism:
Yoonia rosea
NCBI taxonomy Id: 287098
Other names: CIP 107851, DSM 29591, KMM 6003, LMG 22534, LMG:22534, Loktanella rosea, Loktanella rosea Ivanova et al. 2005, Y. rosea, strain Fg36
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