STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT78850.1Chromate reductase. (185 aa)    
Predicted Functional Partners:
SIT78857.1
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein.
 
    0.767
SIT78845.1
Hypothetical protein.
 
     0.724
SIT78836.1
Ureidoglycolate dehydrogenase (NAD+); Belongs to the LDH2/MDH2 oxidoreductase family.
 
     0.719
SIT83513.1
Reductive dehalogenase.
    
  0.637
SIT75360.1
NAD(P)H-dependent FMN reductase.
  
     0.592
SIT78831.1
Putative tricarboxylic transport membrane protein.
 
     0.578
SIT87279.1
Natural product biosynthesis luciferase-like monooxygenase domain-containing protein.
  
 0.549
SIT78823.1
TctA family transporter.
       0.522
SIT75910.1
Alkanesulfonate monooxygenase.
  
 0.512
SIT78862.1
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway).
       0.503
Your Current Organism:
Yoonia rosea
NCBI taxonomy Id: 287098
Other names: CIP 107851, DSM 29591, KMM 6003, LMG 22534, LMG:22534, Loktanella rosea, Loktanella rosea Ivanova et al. 2005, Y. rosea, strain Fg36
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