STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT79676.1Salicylate hydroxylase. (382 aa)    
Predicted Functional Partners:
dksA
Transcriptional regulator, TraR/DksA family; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters.
       0.797
SIT83513.1
Reductive dehalogenase.
     
 0.649
SIT91379.1
Xanthine dehydrogenase, molybdenum binding subunit apoprotein.
   
 
 0.583
SIT83995.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family.
   
    0.580
SIT79689.1
MoxR-like ATPase.
       0.569
SIT75487.1
Isoquinoline 1-oxidoreductase, alpha subunit.
  
 
 0.487
SIT75989.1
Hypothetical protein; Belongs to the cytochrome P450 family.
   
 0.466
SIT76611.1
Cytochrome P450.
   
 0.466
SIT87282.1
Acyl transferase domain-containing protein.
  
 
 0.465
SIT76352.1
NAD(P)H-binding.
  
   0.437
Your Current Organism:
Yoonia rosea
NCBI taxonomy Id: 287098
Other names: CIP 107851, DSM 29591, KMM 6003, LMG 22534, LMG:22534, Loktanella rosea, Loktanella rosea Ivanova et al. 2005, Y. rosea, strain Fg36
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.