STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT80027.1Protein of unknown function. (137 aa)    
Predicted Functional Partners:
SIT80021.1
Phage major tail protein, TP901-1 family.
 
 
   0.999
SIT80034.1
Head-tail adaptor.
 
 
   0.999
SIT79992.1
TIGR02217 family protein.
 
   0.998
SIT80042.1
Phage conserved hypothetical protein, phiE125 gp8 family.
 
 
   0.998
SIT79974.1
Putative phage tail protein.
 
 
   0.997
SIT79987.1
Phage conserved hypothetical protein BR0599.
 
 
   0.997
SIT80048.1
Phage major capsid protein, HK97 family.
 
 
   0.996
SIT80068.1
Phage portal protein, HK97 family.
 
 
   0.995
SIT79999.1
Phage tail tape measure protein, lambda family.
 
    0.957
SIT84334.1
Hypothetical protein.
    
   0.956
Your Current Organism:
Yoonia rosea
NCBI taxonomy Id: 287098
Other names: CIP 107851, DSM 29591, KMM 6003, LMG 22534, LMG:22534, Loktanella rosea, Loktanella rosea Ivanova et al. 2005, Y. rosea, strain Fg36
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.