STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT81274.1Hypothetical protein. (204 aa)    
Predicted Functional Partners:
SIT90817.1
ATPase family associated with various cellular activities (AAA).
   
 0.850
SIT84070.1
L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
    
  0.696
SIT81268.1
Hypothetical protein.
       0.550
SIT81677.1
Serine/threonine protein kinase.
      0.540
SIT75699.1
Hypothetical protein.
 
    
0.531
SIT81570.1
Mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  
 0.518
SIT88211.1
Non-specific serine/threonine protein kinase.
      0.518
SIT79403.1
ATP-binding cassette, subfamily F, member 3.
  
     0.506
SIT74363.1
ATP-binding cassette, subfamily B.
  
  
  0.466
SIT82370.1
ATP-binding cassette, subfamily B.
  
  
  0.457
Your Current Organism:
Yoonia rosea
NCBI taxonomy Id: 287098
Other names: CIP 107851, DSM 29591, KMM 6003, LMG 22534, LMG:22534, Loktanella rosea, Loktanella rosea Ivanova et al. 2005, Y. rosea, strain Fg36
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.