STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT81738.1ATPase, P-type (transporting), HAD superfamily, subfamily IC/heavy metal translocating P-type ATPase. (629 aa)    
Predicted Functional Partners:
SIT81743.1
Cryptococcal mannosyltransferase 1.
       0.506
SIT77347.1
DNA-3-methyladenine glycosylase II.
   
 
 0.459
SIT77322.1
Predicted arabinose efflux permease, MFS family.
      
 0.410
SIT77351.1
Phospholipase/carboxylesterase.
      
 0.410
SIT85848.1
TIGR00288 family protein.
      
 0.410
Your Current Organism:
Yoonia rosea
NCBI taxonomy Id: 287098
Other names: CIP 107851, DSM 29591, KMM 6003, LMG 22534, LMG:22534, Loktanella rosea, Loktanella rosea Ivanova et al. 2005, Y. rosea, strain Fg36
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.