STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT82315.1Chemotaxis protein CheX. (95 aa)    
Predicted Functional Partners:
SIT78025.1
Serine/threonine-protein kinase RsbW.
  
 0.991
SIT83899.1
Signal transduction histidine kinase.
  
 
 0.976
SIT87761.1
phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein.
   
  0.966
SIT87757.1
phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein.
  
  0.965
SIT87770.1
phospholipid/cholesterol/gamma-HCH transport system permease protein.
   
  0.964
SIT78017.1
sigma-B regulation protein RsbU (phosphoserine phosphatase).
  
 0.937
SIT90379.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
   
 0.925
SIT82320.1
Response regulator receiver protein.
  
 
 0.900
SIT82340.1
Two-component system, chemotaxis family, response regulator CheY.
    
 0.884
SIT82324.1
Two-component system, chemotaxis family, sensor kinase CheA.
    
 0.824
Your Current Organism:
Yoonia rosea
NCBI taxonomy Id: 287098
Other names: CIP 107851, DSM 29591, KMM 6003, LMG 22534, LMG:22534, Loktanella rosea, Loktanella rosea Ivanova et al. 2005, Y. rosea, strain Fg36
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.