STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT82345.1Hypothetical protein. (127 aa)    
Predicted Functional Partners:
SIT82315.1
Chemotaxis protein CheX.
       0.773
SIT82320.1
Response regulator receiver protein.
       0.773
SIT82324.1
Two-component system, chemotaxis family, sensor kinase CheA.
       0.773
SIT82327.1
CheW protein.
       0.773
SIT82333.1
Chemotaxis protein methyltransferase CheR; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP.
       0.773
SIT82340.1
Two-component system, chemotaxis family, response regulator CheY.
       0.773
SIT82308.1
Group 4 capsule polysaccharide lipoprotein gfcB, YjbF.
       0.488
SIT82313.1
Exopolysaccharide biosynthesis protein YbjH.
       0.488
SIT82351.1
CheB methylesterase.
       0.459
cheD
CheD, stimulates methylation of MCP proteins; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.
       0.459
Your Current Organism:
Yoonia rosea
NCBI taxonomy Id: 287098
Other names: CIP 107851, DSM 29591, KMM 6003, LMG 22534, LMG:22534, Loktanella rosea, Loktanella rosea Ivanova et al. 2005, Y. rosea, strain Fg36
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