STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT82374.1Selenium-binding protein 1. (466 aa)    
Predicted Functional Partners:
SIT82379.1
Hypothetical protein; Manually curated.
 
     0.959
SIT88652.1
Glutamate synthase (NADPH) large subunit.
    
  0.879
SIT75784.1
Cytochrome c peroxidase.
  
 
 0.867
SIT75857.1
Cytochrome c peroxidase.
  
 
 0.867
SIT77465.1
5-methyltetrahydrofolate--homocysteine methyltransferase.
    
  0.822
SIT77597.1
5-methyltetrahydrofolate--homocysteine methyltransferase.
    
  0.822
SIT89022.1
Protein-S-isoprenylcysteine O-methyltransferase Ste14.
 
  
  0.822
SIT85601.1
Thiosulfate/3-mercaptopyruvate sulfurtransferase.
    
  0.813
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
    
  0.746
metZ
O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide.
   
 
  0.721
Your Current Organism:
Yoonia rosea
NCBI taxonomy Id: 287098
Other names: CIP 107851, DSM 29591, KMM 6003, LMG 22534, LMG:22534, Loktanella rosea, Loktanella rosea Ivanova et al. 2005, Y. rosea, strain Fg36
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