STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT82849.1Sarcosine oxidase subunit alpha; Belongs to the GcvT family. (978 aa)    
Predicted Functional Partners:
SIT80486.1
Sarcosine oxidase subunit delta.
 
 0.999
SIT82846.1
Sarcosine oxidase subunit gamma.
 
 0.999
SIT82855.1
Sarcosine oxidase subunit delta.
 
 0.999
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
 
 0.998
SIT80475.1
Sarcosine oxidase subunit gamma.
 
 0.998
SIT82859.1
Sarcosine oxidase subunit beta.
 
 0.997
SIT80502.1
Sarcosine oxidase subunit beta.
 
 0.994
SIT78347.1
Dimethylglycine dehydrogenase; Belongs to the GcvT family.
 
0.989
SIT85124.1
Dimethylglycine dehydrogenase; Belongs to the GcvT family.
 
0.988
SIT90651.1
4-methylaminobutanoate oxidase (formaldehyde-forming); Belongs to the GcvT family.
 
0.988
Your Current Organism:
Yoonia rosea
NCBI taxonomy Id: 287098
Other names: CIP 107851, DSM 29591, KMM 6003, LMG 22534, LMG:22534, Loktanella rosea, Loktanella rosea Ivanova et al. 2005, Y. rosea, strain Fg36
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