STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT83549.1Uncharacterized conserved protein, DUF983 family. (129 aa)    
Predicted Functional Partners:
SIT83556.1
8-oxo-dGTP pyrophosphatase MutT, NUDIX family.
 
     0.902
ctaG
Cytochrome c oxidase assembly protein subunit 11; Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I; Belongs to the COX11/CtaG family.
 
     0.683
SIT83544.1
EF hand.
       0.595
SIT82131.1
Protein of unknown function.
  
     0.594
SIT83538.1
RNA polymerase, sigma subunit, ECF family; Belongs to the sigma-70 factor family. ECF subfamily.
       0.590
SIT90446.1
Signal transduction histidine kinase.
  
     0.564
SIT91682.1
Surfeit locus 1 family protein.
 
     0.549
SIT82763.1
Hypothetical protein.
  
     0.545
SIT82139.1
Uncharacterized protein, UPF0262 family; Belongs to the UPF0262 family.
 
     0.543
SIT78231.1
Protein of unknown function; Manually curated.
  
     0.524
Your Current Organism:
Yoonia rosea
NCBI taxonomy Id: 287098
Other names: CIP 107851, DSM 29591, KMM 6003, LMG 22534, LMG:22534, Loktanella rosea, Loktanella rosea Ivanova et al. 2005, Y. rosea, strain Fg36
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.