STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT83955.1Hypothetical protein. (1439 aa)    
Predicted Functional Partners:
SIT87249.1
DNA translocase FtsK.
    
   0.795
SIT83959.1
Microcystin-dependent protein.
 
     0.648
SIT76241.1
Subtilase family protein; Belongs to the peptidase S8 family.
  
 0.571
SIT83965.1
Protein of unknown function.
 
     0.551
SIT76208.1
Hypothetical protein.
  
 0.520
SIT83925.1
Phosphotransferase enzyme family protein.
  
     0.489
SIT83914.1
Lanthionine synthetase C-like protein.
  
     0.475
SIT90644.1
Carboxyl-terminal processing protease; Belongs to the peptidase S41A family.
   
   0.453
SIT80042.1
Phage conserved hypothetical protein, phiE125 gp8 family.
  
  0.447
SIT87395.1
Polygalacturonase; Belongs to the glycosyl hydrolase 28 family.
  
  0.445
Your Current Organism:
Yoonia rosea
NCBI taxonomy Id: 287098
Other names: CIP 107851, DSM 29591, KMM 6003, LMG 22534, LMG:22534, Loktanella rosea, Loktanella rosea Ivanova et al. 2005, Y. rosea, strain Fg36
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.