STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT85630.1Cell division transport system permease protein. (297 aa)    
Predicted Functional Partners:
SIT85634.1
Cell division transport system ATP-binding protein.
 
 0.999
SIT90641.1
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB.
 
 
 
 0.990
SIT85627.1
1-acyl-sn-glycerol-3-phosphate acyltransferase.
     
 0.911
SIT85623.1
Hypothetical protein.
       0.860
SIT85638.1
MJ0042 family finger-like domain-containing protein.
 
   
 0.843
ftsQ
Cell division protein FtsQ; Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily.
  
 
 
 0.668
SIT76713.1
N-acetylmuramoyl-L-alanine amidase.
 
   
 0.604
SIT88659.1
Glutathione S-transferase.
  
   
 0.537
SIT78107.1
Histidine phosphotransferase ChpT.
  
     0.534
SIT84851.1
Core-2/I-Branching enzyme.
  
     0.509
Your Current Organism:
Yoonia rosea
NCBI taxonomy Id: 287098
Other names: CIP 107851, DSM 29591, KMM 6003, LMG 22534, LMG:22534, Loktanella rosea, Loktanella rosea Ivanova et al. 2005, Y. rosea, strain Fg36
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.