STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT86286.1Serine/threonine protein kinase. (746 aa)    
Predicted Functional Partners:
SIT86289.1
FHA domain-containing protein.
 
 
 
 0.984
SIT86294.1
Serine/threonine protein phosphatase PrpC.
 
 0.951
SIT90379.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
 
 
 0.899
SIT83176.1
Serine/threonine protein phosphatase PrpC.
 
 0.877
SIT89312.1
Protein phosphatase.
 
 0.872
SIT86300.1
Dynamin family protein.
 
     0.848
SIT86304.1
Dynamin family protein.
 
     0.847
SIT83899.1
Signal transduction histidine kinase.
   
 0.812
SIT86296.1
Hypothetical protein.
  
 0.792
SIT89306.1
Serine/threonine protein kinase.
  
     0.757
Your Current Organism:
Yoonia rosea
NCBI taxonomy Id: 287098
Other names: CIP 107851, DSM 29591, KMM 6003, LMG 22534, LMG:22534, Loktanella rosea, Loktanella rosea Ivanova et al. 2005, Y. rosea, strain Fg36
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.