STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT87288.1Glycosyltransferase involved in cell wall bisynthesis. (403 aa)    
Predicted Functional Partners:
SIT87287.1
Hypothetical protein.
 
 
  0.876
SIT87261.1
Membrane protein involved in the export of O-antigen and teichoic acid.
 
 
 0.860
SIT81570.1
Mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
 
 0.811
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.809
SIT87279.1
Natural product biosynthesis luciferase-like monooxygenase domain-containing protein.
 
  
 0.802
SIT87284.1
Glycosyl transferase family 2.
  
  0.796
SIT87282.1
Acyl transferase domain-containing protein.
 
  
 0.792
SIT87281.1
Hypothetical protein.
 
    0.773
SIT87256.1
Glycosyltransferase involved in cell wall bisynthesis.
  
     0.759
SIT87273.1
Glycosyltransferase, GT2 family.
    0.751
Your Current Organism:
Yoonia rosea
NCBI taxonomy Id: 287098
Other names: CIP 107851, DSM 29591, KMM 6003, LMG 22534, LMG:22534, Loktanella rosea, Loktanella rosea Ivanova et al. 2005, Y. rosea, strain Fg36
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.