Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIT87268.1 | SIT87839.1 | SAMN05421665_2324 | SAMN05421665_2547 | dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family. | UDP-glucuronate 4-epimerase. | 0.757 |
SIT87268.1 | gmd | SAMN05421665_2324 | SAMN05421665_1290 | dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family. | GDPmannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose. | 0.594 |
SIT87279.1 | SIT87282.1 | SAMN05421665_2331 | SAMN05421665_2333 | Natural product biosynthesis luciferase-like monooxygenase domain-containing protein. | Acyl transferase domain-containing protein. | 0.999 |
SIT87279.1 | SIT87836.1 | SAMN05421665_2331 | SAMN05421665_2546 | Natural product biosynthesis luciferase-like monooxygenase domain-containing protein. | UDP-glucose dehydrogenase. | 0.931 |
SIT87279.1 | SIT87839.1 | SAMN05421665_2331 | SAMN05421665_2547 | Natural product biosynthesis luciferase-like monooxygenase domain-containing protein. | UDP-glucuronate 4-epimerase. | 0.758 |
SIT87279.1 | rpsC | SAMN05421665_2331 | SAMN05421665_2964 | Natural product biosynthesis luciferase-like monooxygenase domain-containing protein. | SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.475 |
SIT87282.1 | SIT87279.1 | SAMN05421665_2333 | SAMN05421665_2331 | Acyl transferase domain-containing protein. | Natural product biosynthesis luciferase-like monooxygenase domain-containing protein. | 0.999 |
SIT87282.1 | SIT87836.1 | SAMN05421665_2333 | SAMN05421665_2546 | Acyl transferase domain-containing protein. | UDP-glucose dehydrogenase. | 0.439 |
SIT87282.1 | SIT87839.1 | SAMN05421665_2333 | SAMN05421665_2547 | Acyl transferase domain-containing protein. | UDP-glucuronate 4-epimerase. | 0.791 |
SIT87282.1 | SIT88652.1 | SAMN05421665_2333 | SAMN05421665_2766 | Acyl transferase domain-containing protein. | Glutamate synthase (NADPH) large subunit. | 0.862 |
SIT87836.1 | SIT87279.1 | SAMN05421665_2546 | SAMN05421665_2331 | UDP-glucose dehydrogenase. | Natural product biosynthesis luciferase-like monooxygenase domain-containing protein. | 0.931 |
SIT87836.1 | SIT87282.1 | SAMN05421665_2546 | SAMN05421665_2333 | UDP-glucose dehydrogenase. | Acyl transferase domain-containing protein. | 0.439 |
SIT87836.1 | SIT87839.1 | SAMN05421665_2546 | SAMN05421665_2547 | UDP-glucose dehydrogenase. | UDP-glucuronate 4-epimerase. | 0.975 |
SIT87836.1 | gmd | SAMN05421665_2546 | SAMN05421665_1290 | UDP-glucose dehydrogenase. | GDPmannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose. | 0.689 |
SIT87839.1 | SIT87268.1 | SAMN05421665_2547 | SAMN05421665_2324 | UDP-glucuronate 4-epimerase. | dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family. | 0.757 |
SIT87839.1 | SIT87279.1 | SAMN05421665_2547 | SAMN05421665_2331 | UDP-glucuronate 4-epimerase. | Natural product biosynthesis luciferase-like monooxygenase domain-containing protein. | 0.758 |
SIT87839.1 | SIT87282.1 | SAMN05421665_2547 | SAMN05421665_2333 | UDP-glucuronate 4-epimerase. | Acyl transferase domain-containing protein. | 0.791 |
SIT87839.1 | SIT87836.1 | SAMN05421665_2547 | SAMN05421665_2546 | UDP-glucuronate 4-epimerase. | UDP-glucose dehydrogenase. | 0.975 |
SIT87839.1 | SIT88652.1 | SAMN05421665_2547 | SAMN05421665_2766 | UDP-glucuronate 4-epimerase. | Glutamate synthase (NADPH) large subunit. | 0.753 |
SIT87839.1 | gmd | SAMN05421665_2547 | SAMN05421665_1290 | UDP-glucuronate 4-epimerase. | GDPmannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose. | 0.764 |
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