STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT87856.1Mannose-binding protein /fructose-binding protein /ribose-binding protein. (342 aa)    
Predicted Functional Partners:
SIT83899.1
Signal transduction histidine kinase.
   
 0.997
SIT87851.1
Mannose ABC transporter ATP-binding protein.
 
  0.966
SIT87853.1
Mannose ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family.
  0.965
SIT87860.1
Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain.
 
  
 0.890
SIT87739.1
PAS/PAC sensor hybrid histidine kinase; Manually curated.
   
 0.875
SIT90379.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
 
 
 0.873
SIT74451.1
Monosaccharide ABC transporter membrane protein, CUT2 family; Belongs to the binding-protein-dependent transport system permease family.
 
  0.855
SIT74446.1
Monosaccharide ABC transporter ATP-binding protein, CUT2 family.
 
  0.842
SIT90696.1
Erythritol ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family.
  0.788
SIT81285.1
Monosaccharide ABC transporter ATP-binding protein, CUT2 family.
  
  0.785
Your Current Organism:
Yoonia rosea
NCBI taxonomy Id: 287098
Other names: CIP 107851, DSM 29591, KMM 6003, LMG 22534, LMG:22534, Loktanella rosea, Loktanella rosea Ivanova et al. 2005, Y. rosea, strain Fg36
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