STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT88585.1Protein of unknown function. (192 aa)    
Predicted Functional Partners:
SIT88598.1
Protein of unknown function.
 
    0.990
SIT88583.1
Chaperone TorD involved in molybdoenzyme TorA maturation.
     0.984
SIT88579.1
Formate dehydrogenase region TAT target.
 
     0.941
SIT88601.1
4Fe-4S dicluster domain-containing protein.
 
     0.924
SIT88575.1
Formate dehydrogenase alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
     0.887
SIT88612.1
Biotin-(acetyl-CoA carboxylase) ligase.
 
     0.861
SIT88615.1
Hypothetical protein.
 
     0.861
SIT88565.1
Formate dehydrogenase gamma subunit.
 
     0.854
SIT88604.1
Hypothetical protein.
 
     0.851
SIT88570.1
Formate dehydrogenase beta subunit.
 
     0.840
Your Current Organism:
Yoonia rosea
NCBI taxonomy Id: 287098
Other names: CIP 107851, DSM 29591, KMM 6003, LMG 22534, LMG:22534, Loktanella rosea, Loktanella rosea Ivanova et al. 2005, Y. rosea, strain Fg36
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.