STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT88716.1Two-component system, OmpR family, phosphate regulon response regulator OmpR. (233 aa)    
Predicted Functional Partners:
SIT83899.1
Signal transduction histidine kinase.
0.995
SIT87739.1
PAS/PAC sensor hybrid histidine kinase; Manually curated.
 0.980
SIT90379.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
   
 0.971
SIT77936.1
Two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ.
 0.946
SIT78678.1
Two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR.
 0.940
SIT90382.1
PAS domain S-box-containing protein.
 
 0.902
SIT82652.1
Formate dehydrogenase.
   
 
 0.887
SIT87370.1
Signal transduction histidine kinase.
 
 0.823
SIT90979.1
Two-component system, OmpR family, sensor histidine kinase ChvG.
 0.781
SIT88711.1
Transcriptional regulator, MarR family.
     
 0.780
Your Current Organism:
Yoonia rosea
NCBI taxonomy Id: 287098
Other names: CIP 107851, DSM 29591, KMM 6003, LMG 22534, LMG:22534, Loktanella rosea, Loktanella rosea Ivanova et al. 2005, Y. rosea, strain Fg36
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.