STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT88822.1NitT/TauT family transport system substrate-binding protein. (330 aa)    
Predicted Functional Partners:
SIT88820.1
NitT/TauT family transport system permease protein.
 
 
  0.955
SIT88815.1
NitT/TauT family transport system permease protein.
 
 
  0.949
SIT88813.1
NitT/TauT family transport system ATP-binding protein.
 
 
  0.930
SIT88804.1
Dihydropyrimidinase.
 
    0.853
SIT88797.1
N-carbamoyl-L-amino-acid hydrolase.
 
     0.741
SIT74134.1
Assimilatory nitrate reductase (NADH) alpha subunit apoprotein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
    
 0.725
SIT88792.1
Transcriptional regulator, TetR family.
 
     0.715
SIT74503.1
Putative hydroxymethylpyrimidine transport system permease protein.
 
 
  0.693
SIT88782.1
Dihydropyrimidine dehydrogenase (NAD+) subunit PreA.
 
     0.632
SIT77909.1
NitT/TauT family transport system permease protein.
 
 
  0.600
Your Current Organism:
Yoonia rosea
NCBI taxonomy Id: 287098
Other names: CIP 107851, DSM 29591, KMM 6003, LMG 22534, LMG:22534, Loktanella rosea, Loktanella rosea Ivanova et al. 2005, Y. rosea, strain Fg36
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.