STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT89033.1Predicted unusual protein kinase regulating ubiquinone biosynthesis, AarF/ABC1/UbiB family. (445 aa)    
Predicted Functional Partners:
SIT89027.1
TIGR03643 family protein.
       0.675
SIT89022.1
Protein-S-isoprenylcysteine O-methyltransferase Ste14.
 
     0.607
SIT90907.1
Ubiquinone biosynthesis protein COQ9.
   
 
 0.480
SIT90379.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
     
 0.454
SIT74336.1
Hypothetical protein.
   
 
 0.443
SIT78362.1
Porphobilinogen synthase; Belongs to the ALAD family.
    
 0.424
Your Current Organism:
Yoonia rosea
NCBI taxonomy Id: 287098
Other names: CIP 107851, DSM 29591, KMM 6003, LMG 22534, LMG:22534, Loktanella rosea, Loktanella rosea Ivanova et al. 2005, Y. rosea, strain Fg36
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.