STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT90115.1Chaperone required for the assembly of the F1-ATPase. (236 aa)    
Predicted Functional Partners:
SIT90112.1
Phosphoglycolate phosphatase.
      0.926
SIT90108.1
Ribosomal large subunit pseudouridine synthase C; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.
 
     0.911
crcB
Camphor resistance protein CrcB; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.
       0.860
SIT90103.1
Putative ATPase.
 
     0.824
SIT82595.1
NADH:ubiquinone oxidoreductase subunit.
  
     0.717
SIT88223.1
Methyltransferase domain-containing protein.
  
     0.678
SIT90117.1
L-glutamine-binding protein /L-glutamate-binding protein /L-aspartate-binding protein /L-asparagine-binding protein.
       0.670
rplQ
LSU ribosomal protein L17P.
 
     0.667
SIT80354.1
Uncharacterized conserved protein, contains Mth938-like domain.
 
     0.601
SIT82019.1
Pimeloyl-ACP methyl ester carboxylesterase.
  
     0.599
Your Current Organism:
Yoonia rosea
NCBI taxonomy Id: 287098
Other names: CIP 107851, DSM 29591, KMM 6003, LMG 22534, LMG:22534, Loktanella rosea, Loktanella rosea Ivanova et al. 2005, Y. rosea, strain Fg36
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