STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT90166.1Putrescine transport system permease protein. (298 aa)    
Predicted Functional Partners:
SIT90170.1
Putrescine transport system permease protein.
 
  0.999
SIT90160.1
Putrescine transport system substrate-binding protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.
 
  0.997
SIT90238.1
Spermidine/putrescine transport system permease protein.
 
  0.988
SIT87831.1
Putative spermidine/putrescine transport system permease protein.
 
 
0.983
potA-2
Putrescine transport system ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
  0.981
SIT90408.1
Spermidine/putrescine transport system permease protein.
 
  0.917
SIT88675.1
Putative spermidine/putrescine transport system permease protein.
 
  0.887
SIT90414.1
Spermidine/putrescine transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
  0.884
SIT90240.1
Spermidine/putrescine transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
  0.859
SIT90415.1
Spermidine/putrescine transport system substrate-binding protein.
 
 
  0.826
Your Current Organism:
Yoonia rosea
NCBI taxonomy Id: 287098
Other names: CIP 107851, DSM 29591, KMM 6003, LMG 22534, LMG:22534, Loktanella rosea, Loktanella rosea Ivanova et al. 2005, Y. rosea, strain Fg36
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.