STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT90502.1Hypothetical protein. (123 aa)    
Predicted Functional Partners:
SIT85342.1
(R)-ethylmalonyl-CoA mutase.
  
  
  0.674
SIT90508.1
Putative ABC transport system permease protein.
       0.601
SIT90505.1
Putative ABC transport system ATP-binding protein.
       0.581
SIT90517.1
Predicted secreted hydrolase.
       0.581
SIT90519.1
Pyridoxamine 5'-phosphate oxidase.
       0.581
SIT90523.1
Selenophosphate synthase.
       0.581
SIT90499.1
acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
       0.523
SIT74935.1
Transcriptional regulator, MerR family.
  
     0.443
Your Current Organism:
Yoonia rosea
NCBI taxonomy Id: 287098
Other names: CIP 107851, DSM 29591, KMM 6003, LMG 22534, LMG:22534, Loktanella rosea, Loktanella rosea Ivanova et al. 2005, Y. rosea, strain Fg36
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.