STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT90655.1Homocysteine S-methyltransferase. (292 aa)    
Predicted Functional Partners:
SIT77465.1
5-methyltetrahydrofolate--homocysteine methyltransferase.
 
  
 0.871
SIT90664.1
GAF domain-containing protein.
    
  0.821
metK
Methionine adenosyltransferase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.
     
 0.790
SIT90651.1
4-methylaminobutanoate oxidase (formaldehyde-forming); Belongs to the GcvT family.
 
 
  0.786
SIT90658.1
Dimethylglycine dehydrogenase; Belongs to the GcvT family.
 
 
  0.772
SIT77597.1
5-methyltetrahydrofolate--homocysteine methyltransferase.
  
 
0.730
SIT81773.1
O-acetylhomoserine sulfhydrylase.
     
 0.709
SIT90662.1
Transcriptional regulator, XRE family with cupin sensor.
 
    0.661
SIT89022.1
Protein-S-isoprenylcysteine O-methyltransferase Ste14.
 
  
  0.634
SIT85605.1
Aromatic amino acid aminotransferase apoenzyme.
  
  
 0.585
Your Current Organism:
Yoonia rosea
NCBI taxonomy Id: 287098
Other names: CIP 107851, DSM 29591, KMM 6003, LMG 22534, LMG:22534, Loktanella rosea, Loktanella rosea Ivanova et al. 2005, Y. rosea, strain Fg36
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