STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT90702.1Predicted lipoprotein. (215 aa)    
Predicted Functional Partners:
SIT90691.1
Hypothetical protein.
 
     0.941
SIT90695.1
Predicted dehydrogenase.
 
     0.935
SIT90696.1
Erythritol ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family.
 
     0.922
SIT90700.1
Erythritol ABC transporter ATP-binding protein.
 
     0.908
SIT90705.1
Erythritol-binding protein.
 
    0.903
SIT90685.1
NADP oxidoreductase coenzyme F420-dependent.
 
     0.695
SIT90684.1
Uncharacterized conserved protein YgbK, DUF1537 family.
  
     0.603
SIT90689.1
Transcriptional regulator, GntR family.
  
     0.515
SIT78799.1
NIPSNAP protein.
  
     0.410
Your Current Organism:
Yoonia rosea
NCBI taxonomy Id: 287098
Other names: CIP 107851, DSM 29591, KMM 6003, LMG 22534, LMG:22534, Loktanella rosea, Loktanella rosea Ivanova et al. 2005, Y. rosea, strain Fg36
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.