STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT90825.1Hypothetical protein. (90 aa)    
Predicted Functional Partners:
SIT90822.1
Hypothetical protein.
 
     0.961
SIT90827.1
Protein of unknown function.
 
    0.945
SIT90817.1
ATPase family associated with various cellular activities (AAA).
 
     0.931
SIT90814.1
Hypothetical protein.
 
     0.900
SIT90812.1
Hypothetical protein.
 
     0.876
SIT90820.1
Hypothetical protein.
       0.789
SIT74801.1
Hypothetical protein.
  
     0.753
SIT83186.1
Endonuclease/Exonuclease/phosphatase family protein.
  
     0.734
SIT76458.1
Paraquat-inducible protein A.
  
     0.581
SIT86046.1
Hypothetical protein.
  
     0.507
Your Current Organism:
Yoonia rosea
NCBI taxonomy Id: 287098
Other names: CIP 107851, DSM 29591, KMM 6003, LMG 22534, LMG:22534, Loktanella rosea, Loktanella rosea Ivanova et al. 2005, Y. rosea, strain Fg36
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.